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Bioinformatics Analyst II

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Actalent

Sep 23

Applications are closed

  • Job
    Full-time
    Mid Level
  • Cambridge

Requirements

  • Must have experienced with any of the following python models: pandas, numpy, scanpy, anndata, scikit-learn. Being familiar with: pytorch or keras, scvi-tools or scarches
  • M.S. in bioinformatics computational biology proteomics biochemistry or a related field.
  • Proficiency in programming languages such as R and Python and experience working in Unix/Linux environments.
  • Being experienced with pandas, numpy, scanpy, anndata, scikit-learn
  • Being familiar with: pytorch or keras, scvi-tools or scarches
  • Knowledge of statistical methods and machine learning techniques applicable to the analysis of large-scale proteomics datasets.

Responsibilities

  • Perform advanced analysis of high-dimensional proteomics data including CyTOF Flow Cytometry and MS to generate actionable insights into disease mechanisms.
  • Help develop and optimize computational workflows and pipelines for processing analyzing and interpreting proteomics datasets.
  • Perform image-based quantification of proteins using IMC focusing on spatial distribution and co-localization of immune cells and other tissue components in situ.
  • Collaborate with multidisciplinary teams including immunologists data scientists and biologists to interpret proteomics data and translate findings into preclinical and clinical research applications.
  • Present complex analytical approaches and results to both technical and non-technical stakeholders effectively communicating the scientific rationale and implications.

FAQs

What programming languages should I be proficient in for this position?

You should be proficient in programming languages such as R and Python.

Are there specific Python libraries I need to be experienced with?

Yes, you should have experience with pandas, numpy, scanpy, anndata, and scikit-learn.

Is familiarity with deep learning frameworks necessary for this role?

Yes, being familiar with pytorch or keras is preferred, along with tools like scvi-tools or scarches.

What level of education is required for this position?

A Master's degree in bioinformatics, computational biology, proteomics, biochemistry, or a related field is required.

Will I need to analyze high-dimensional proteomics data?

Yes, you will perform advanced analysis of high-dimensional proteomics data, including techniques such as CyTOF and Mass Spectrometry.

Is experience with data analysis techniques specific to CyTOF or Flow Cytometry important?

Yes, familiarity with CyTOF, spatial CyTOF, and Flow Cytometry data analysis techniques is desirable.

Are there opportunities for scientific publications and presentations?

Yes, you will have the opportunity to contribute to the preparation of scientific publications and presentations for conferences.

Will I be collaborating with other teams in this role?

Yes, you will collaborate with multidisciplinary teams, including immunologists, data scientists, and biologists.

What type of work environment should I expect?

You should expect a dynamic, fast-paced research environment that requires a proactive and collaborative approach to problem-solving.

Is there support for diversity and inclusion within the company?

Yes, Actalent emphasizes diversity and inclusion as part of its culture and promotes an inclusive environment for all employees.

An Engineering and Sciences Services Company | People to Possible

Human Resources
Industry
5001-10,000
Employees

Mission & Purpose

Actalent connects passion with purpose. Our scalable talent solutions and services capabilities drive value and results and provide the expertise to help our customers achieve more. Every day, our experts around the globe are making an impact. We’re supporting critical initiatives in engineering and sciences that advance how companies serve the world. Actalent’s global footprint and flexible delivery models ensure access to specialized talent where and when you need it. We promote consultant engagement through professional development and provide experiences to ensure continuous learning. Our people are the difference. Our expertise spans capabilities in engineering including product and manufacturing, systems and software, construction management, environmental, architecture and civil; and power and utilities. We focus on sciences capabilities in laboratory sciences, healthcare, and clinical research. Actalent is an operating company of Allegis Group, the global leader in talent solutions.

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